Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | BCF11_4377 | Not Available | Negative | 4734941 - 4735777 | 31108.5 |
| hypothetical protein | BCF11_4378 | Not Available | Negative | 4735921 - 4736229 | 11375.7 |
| hypoxanthine-dna glycosylase | BCF11_4379 | Not Available | Negative | 4736443 - 4736931 | 17886.7 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | BCF11_4380 | Not Available | Positive | 4737121 - 4737870 | 25730.0 |
| outer membrane lipoprotein slyb | BCF11_4381 | Not Available | Positive | 4738108 - 4738563 | 15060.0 |
| helix-turn-helix protein | BCF11_4382 | Not Available | Negative | 4738688 - 4739257 | 20159.1 |
| 2-amino-3-ketobutyrate coenzyme a ligase | BCF11_4383 | Not Available | Positive | 4739414 - 4740643 | 44463.4 |
| nucleoside-diphosphate-sugar epimerase | BCF11_4384 | Not Available | Positive | 4740667 - 4741632 | 35178.9 |
| hypothetical protein | BCF11_4385 | Not Available | Positive | 4741941 - 4742159 | 8198.77 |
| hypothetical protein | BCF11_4386 | Not Available | Positive | 4742175 - 4742585 | 15116.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
