Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate binding protein with cbm6 domain | BCF11_4296 | Not Available | Negative | 4638755 - 4641088 | 80965.8 |
| alginate lyase | BCF11_4297 | Not Available | Negative | 4641110 - 4642417 | 46209.9 |
| glycosyl hydrolase family 18 (putative chitinase) | BCF11_4298 | Not Available | Negative | 4642546 - 4643811 | 43800.9 |
| short-subunit dehydrogenase | BCF11_4300 | Not Available | Negative | 4645425 - 4646231 | 28553.6 |
| multidrug efflux pump subunit acrb | BCF11_4301 | Not Available | Negative | 4646273 - 4649341 | 111795.0 |
| rnd family efflux transporter mfp subunit | BCF11_4302 | Not Available | Negative | 4649338 - 4650447 | 38856.4 |
| tetr family transcriptional regulator | BCF11_4303 | Not Available | Negative | 4650531 - 4651148 | 23206.6 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | BCF11_4304 | Not Available | Positive | 4651249 - 4652709 | 51602.5 |
| uncharacterized protein duf5051 | BCF11_4305 | Not Available | Negative | 4652854 - 4653327 | 18484.7 |
| ess family glutamate:na+ symporter | BCF11_4306 | Not Available | Positive | 4654063 - 4655268 | 41615.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
