Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyisobutyrate dehydrogenase | BCF11_4127 | Not Available | Positive | 4455174 - 4456067 | 29893.4 |
| succinylglutamate desuccinylase/aspartoacylase family protein | BCF11_4128 | Not Available | Negative | 4456149 - 4457138 | 35863.9 |
| mhs family proline/betaine transporter-like mfs transporter | BCF11_4129 | Not Available | Negative | 4457203 - 4458519 | 46865.3 |
| dna-binding transcriptional lysr family regulator | BCF11_4130 | Not Available | Negative | 4458755 - 4459669 | 33415.3 |
| pathogenicity locus cdd1 protein | BCF11_4131 | Not Available | Negative | 4459736 - 4460074 | 12531.2 |
| rrf2 family protein | BCF11_4132 | Not Available | Positive | 4460112 - 4460564 | 16315.9 |
| putative mfs family arabinose efflux permease | BCF11_4133 | Not Available | Positive | 4460829 - 4462076 | 42423.0 |
| putative blue pigment (indigoidine) exporter | BCF11_4134 | Not Available | Negative | 4462117 - 4463040 | 32545.2 |
| dna-binding marr family transcriptional regulator | BCF11_4135 | Not Available | Positive | 4463104 - 4463646 | 19872.9 |
| elongation factor p | BCF11_4136 | Not Available | Negative | 4463888 - 4464457 | 21471.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
