Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCF11_4115 | Not Available | Positive | 4443524 - 4444468 | 36298.4 |
| nadph2:quinone reductase | BCF11_4118 | Not Available | Positive | 4445844 - 4446854 | 34979.2 |
| hypothetical protein | BCF11_4119 | Not Available | Positive | 4446929 - 4447852 | 35247.2 |
| hypothetical protein | BCF11_4120 | Not Available | Positive | 4447901 - 4448428 | 19268.9 |
| uncharacterized protein duf1439 | BCF11_4121 | Not Available | Positive | 4448572 - 4449123 | 20185.2 |
| acetyltransferase (gnat) family protein | BCF11_4122 | Not Available | Negative | 4449136 - 4449972 | 29109.8 |
| hypothetical protein | BCF11_4123 | Not Available | Positive | 4450097 - 4451185 | 37863.3 |
| dna-binding transcriptional lysr family regulator | BCF11_4124 | Not Available | Negative | 4451212 - 4452150 | 35329.3 |
| branched-chain amino acid transport system substrate-binding protein | BCF11_4125 | Not Available | Positive | 4452303 - 4453526 | 43719.3 |
| malonate-semialdehyde dehydrogenase (acetylating)/methylmalonate-semialdehyde dehydrogenase | BCF11_4126 | Not Available | Positive | 4453602 - 4455101 | 53308.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
