Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system permease protein | BCF11_4084 | Not Available | Positive | 4410479 - 4411330 | 31349.9 |
| putative spermidine/putrescine transport system substrate-binding protein | BCF11_4085 | Not Available | Positive | 4411404 - 4412516 | 41551.3 |
| putative spermidine/putrescine transport system permease protein | BCF11_4086 | Not Available | Positive | 4412541 - 4413779 | 45352.1 |
| putative spermidine/putrescine transport system permease protein | BCF11_4087 | Not Available | Positive | 4413790 - 4414605 | 28896.3 |
| branched-chain amino acid aminotransferase | BCF11_4088 | Not Available | Positive | 4414598 - 4415554 | 35467.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | BCF11_4089 | Not Available | Positive | 4415542 - 4416285 | 25457.6 |
| dna-binding gntr family transcriptional regulator | BCF11_4090 | Not Available | Negative | 4416295 - 4417026 | 27067.8 |
| transketolase | BCF11_4091 | Not Available | Negative | 4417422 - 4418405 | 35197.4 |
| transketolase | BCF11_4092 | Not Available | Negative | 4418409 - 4419296 | 32811.2 |
| 4-aminobutyrate--pyruvate transaminase | BCF11_4093 | Not Available | Positive | 4419404 - 4420837 | 51200.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
