Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vapb protein of antitoxin of type ii toxin-antitoxin system | BCF11_0217 | Not Available | Positive | 234772 - 234969 | 7274.77 |
| hypothetical protein | BCF11_0218 | Not Available | Positive | 234966 - 235337 | 13572.5 |
| hypothetical protein | BCF11_0219 | Not Available | Negative | 235285 - 236343 | 38754.7 |
| chitinase | BCF11_0221 | Not Available | Negative | 236842 - 238392 | 57155.4 |
| hypothetical protein | BCF11_0222 | Not Available | Negative | 238619 - 239122 | 18387.1 |
| hypothetical protein | BCF11_0223 | Not Available | Negative | 239125 - 239415 | 10200.6 |
| dna-binding transcriptional lysr family regulator | BCF11_0224 | Not Available | Negative | 239422 - 240333 | 33710.7 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | BCF11_0225 | Not Available | Positive | 240475 - 241227 | 26624.9 |
| transposase inso family protein | BCF11_0226 | Not Available | Negative | 241314 - 242852 | 59127.8 |
| dna-binding transcriptional lysr family regulator | BCF11_0227 | Not Available | Negative | 243227 - 244135 | 33437.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
