Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,4-diketo-3-deoxy-l-fuconate hydrolase | BCF11_3832 | Not Available | Positive | 4142866 - 4143720 | 30741.0 |
| l-fuconate dehydratase | BCF11_3833 | Not Available | Positive | 4143738 - 4145015 | 47620.4 |
| l-fucose dehydrogenase | BCF11_3834 | Not Available | Positive | 4145102 - 4145878 | 27239.8 |
| ribose transport system atp-binding protein | BCF11_3835 | Not Available | Positive | 4145988 - 4147571 | 57929.2 |
| ribose transport system permease protein | BCF11_3836 | Not Available | Positive | 4147605 - 4148639 | 36004.2 |
| ribose transport system substrate-binding protein | BCF11_3837 | Not Available | Positive | 4148748 - 4149686 | 33135.1 |
| putative porin | BCF11_3838 | Not Available | Positive | 4149918 - 4150994 | 37507.9 |
| alpha-l-fucosidase 2 | BCF11_3839 | Not Available | Positive | 4151183 - 4154521 | 118219.0 |
| fe-s cluster biosynthesis and repair protein yggx | BCF11_3840 | Not Available | Negative | 4154675 - 4154947 | 10193.2 |
| n-acetylglutamate synthase | BCF11_3841 | Not Available | Negative | 4155042 - 4156361 | 48002.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
