Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | BCF11_3822 | Not Available | Positive | 4128187 - 4129212 | 36071.6 |
| beta-n-acetylhexosaminidase | BCF11_3823 | Not Available | Positive | 4129469 - 4130995 | 53715.7 |
| pat family beta-lactamase induction signal transducer ampg | BCF11_3824 | Not Available | Positive | 4131011 - 4132366 | 48628.4 |
| glycosyl hydrolase family 16 | BCF11_3825 | Not Available | Positive | 4132369 - 4133292 | 33769.4 |
| chitinase | BCF11_3826 | Not Available | Positive | 4133313 - 4134500 | 43250.4 |
| hypothetical protein | BCF11_3827 | Not Available | Negative | 4134537 - 4134887 | 13070.5 |
| glycosyl hydrolase family 18 (putative chitinase) | BCF11_3828 | Not Available | Negative | 4135010 - 4136260 | 42709.8 |
| apa family basic amino acid/polyamine antiporter | BCF11_3829 | Not Available | Positive | 4136929 - 4138326 | 49632.9 |
| zinc protease | BCF11_3830 | Not Available | Negative | 4138907 - 4141669 | 101456.0 |
| 2-keto-3-deoxy-l-fuconate dehydrogenase | BCF11_3831 | Not Available | Positive | 4142036 - 4142800 | 26444.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
