Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate phosphoribosyltransferase | BCF11_3742 | Not Available | Positive | 4044084 - 4045280 | 45969.1 |
| na+/h+ antiporter nhad/arsenite permease-like protein | BCF11_3743 | Not Available | Positive | 4045365 - 4046771 | 50490.0 |
| glyoxylate reductase | BCF11_3744 | Not Available | Positive | 4046793 - 4047803 | 36595.1 |
| acyl-coa-binding protein | BCF11_3745 | Not Available | Negative | 4047878 - 4048132 | 9386.03 |
| hypothetical protein | BCF11_3746 | Not Available | Negative | 4048167 - 4048391 | 7233.85 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | BCF11_3747 | Not Available | Negative | 4048421 - 4048777 | 12313.6 |
| yvtn family beta-propeller protein | BCF11_3748 | Not Available | Positive | 4049034 - 4050044 | 36388.0 |
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | BCF11_3749 | Not Available | Positive | 4050044 - 4050880 | 30594.3 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | BCF11_3750 | Not Available | Positive | 4050890 - 4051876 | 37836.0 |
| etoposide-induced protein 24 (ei24) | BCF11_3751 | Not Available | Positive | 4051876 - 4052748 | 32460.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
