Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine dehydratase | BCF11_3712 | Not Available | Positive | 4009307 - 4010698 | 49344.6 |
| sarcosine oxidase subunit beta | BCF11_3713 | Not Available | Positive | 4010742 - 4011986 | 45160.9 |
| sarcosine oxidase subunit delta | BCF11_3714 | Not Available | Positive | 4012049 - 4012336 | 10959.8 |
| sarcosine oxidase subunit alpha | BCF11_3715 | Not Available | Positive | 4012338 - 4015352 | 108927.0 |
| sarcosine oxidase subunit gamma | BCF11_3716 | Not Available | Positive | 4015342 - 4015947 | 21808.3 |
| dihydroneopterin aldolase | BCF11_3717 | Not Available | Positive | 4015947 - 4016390 | 16307.5 |
| hypothetical protein | BCF11_3718 | Not Available | Negative | 4016451 - 4017749 | 47575.4 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | BCF11_3719 | Not Available | Positive | 4018248 - 4020557 | 83174.8 |
| starch synthase (maltosyl-transferring) | BCF11_3720 | Not Available | Positive | 4020958 - 4022250 | 46026.7 |
| hypothetical protein | BCF11_3721 | Not Available | Negative | 4022256 - 4022813 | 20729.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
