Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macrolide transport system atp-binding/permease protein | BCF11_3702 | Not Available | Negative | 3995686 - 3997662 | 70087.1 |
| macrolide-specific efflux system membrane fusion protein | BCF11_3703 | Not Available | Negative | 3997665 - 3998858 | 42365.1 |
| cytosine deaminase | BCF11_3704 | Not Available | Positive | 3999153 - 4000430 | 45799.8 |
| uncharacterized protein (tigr02001 family) | BCF11_3705 | Not Available | Negative | 4000456 - 4001319 | 30895.0 |
| glycine betaine/proline transport system atp-binding protein | BCF11_3706 | Not Available | Positive | 4001897 - 4003087 | 43096.1 |
| glycine betaine/proline transport system permease protein | BCF11_3707 | Not Available | Positive | 4003080 - 4003976 | 32761.9 |
| transcriptional regulator glxa family with amidase domain | BCF11_3708 | Not Available | Positive | 4004072 - 4005157 | 40217.8 |
| glycine betaine/proline transport system substrate-binding protein | BCF11_3709 | Not Available | Positive | 4005338 - 4006294 | 34459.8 |
| glutathione-independent formaldehyde dehydrogenase | BCF11_3710 | Not Available | Positive | 4006469 - 4007671 | 42179.8 |
| l-threonine aldolase | BCF11_3711 | Not Available | Negative | 4007711 - 4008799 | 40646.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
