Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,4-dienoyl-coa reductase-like nadh-dependent reductase (old yellow enzyme family) | BCF11_3692 | Not Available | Positive | 3982754 - 3984817 | 75392.3 |
| fe-s oxidoreductase | BCF11_3693 | Not Available | Positive | 3984820 - 3986724 | 67875.9 |
| electron transfer flavoprotein alpha subunit | BCF11_3694 | Not Available | Positive | 3986727 - 3987899 | 40328.4 |
| electron transfer flavoprotein beta subunit | BCF11_3695 | Not Available | Positive | 3987896 - 3988681 | 27892.8 |
| rieske 2fe-2s family protein | BCF11_3696 | Not Available | Positive | 3988731 - 3990035 | 49086.3 |
| ferredoxin-nadp reductase | BCF11_3697 | Not Available | Positive | 3990062 - 3991183 | 41299.4 |
| glycine betaine/proline transport system substrate-binding protein | BCF11_3698 | Not Available | Positive | 3991428 - 3992285 | 30784.2 |
| lysr family glycine cleavage system transcriptional activator | BCF11_3699 | Not Available | Negative | 3992292 - 3993194 | 33194.8 |
| threonine/homoserine/homoserine lactone efflux protein | BCF11_3700 | Not Available | Positive | 3993298 - 3993897 | 21943.6 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | BCF11_3701 | Not Available | Negative | 3994232 - 3995689 | 52524.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
