Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family glycine cleavage system transcriptional activator/lysr family transcriptional regulator of beta-lactamase | BCF11_3661 | Not Available | Positive | 3947934 - 3948899 | 35733.2 |
| glycine betaine/proline transport system atp-binding protein | BCF11_3662 | Not Available | Negative | 3948906 - 3949754 | 31251.7 |
| glycine betaine/proline transport system permease protein | BCF11_3663 | Not Available | Negative | 3949758 - 3950630 | 32107.8 |
| glycine betaine/proline transport system substrate-binding protein | BCF11_3664 | Not Available | Negative | 3950772 - 3951800 | 37308.5 |
| succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase | BCF11_3665 | Not Available | Negative | 3951911 - 3953362 | 51244.3 |
| aryl-alcohol dehydrogenase-like predicted oxidoreductase | BCF11_3666 | Not Available | Positive | 3953651 - 3954646 | 37461.7 |
| 5,6,7,8-tetrahydromethanopterin hydro-lyase | BCF11_3667 | Not Available | Positive | 3954692 - 3955195 | 17439.9 |
| lactaldehyde dehydrogenase/glycolaldehyde dehydrogenase | BCF11_3668 | Not Available | Positive | 3955291 - 3956715 | 50856.9 |
| sugar phosphate permease | BCF11_3669 | Not Available | Positive | 3956773 - 3958071 | 47218.0 |
| 2-dehydro-3-deoxyphosphogalactonate aldolase | BCF11_3670 | Not Available | Positive | 3958068 - 3959312 | 46014.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
