Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c peroxidase | BCF11_3621 | Not Available | Negative | 3904239 - 3905699 | 52216.7 |
| phospholipase c | BCF11_3622 | Not Available | Positive | 3906192 - 3908060 | 64418.6 |
| phosphoesterase family protein | BCF11_3623 | Not Available | Positive | 3908221 - 3910041 | 62241.1 |
| lysr family glycine cleavage system transcriptional activator | BCF11_3624 | Not Available | Negative | 3910231 - 3911118 | 33238.8 |
| putative spermidine/putrescine transport system substrate-binding protein | BCF11_3625 | Not Available | Positive | 3911604 - 3912707 | 39369.4 |
| putative spermidine/putrescine transport system permease protein | BCF11_3626 | Not Available | Positive | 3912710 - 3913570 | 30538.7 |
| putative spermidine/putrescine transport system permease protein | BCF11_3627 | Not Available | Positive | 3913567 - 3914412 | 30762.6 |
| putative spermidine/putrescine transport system atp-binding protein | BCF11_3628 | Not Available | Positive | 3914468 - 3915568 | 39543.7 |
| polar amino acid transport system substrate-binding protein | BCF11_3629 | Not Available | Positive | 3915656 - 3916471 | 29093.4 |
| polar amino acid transport system permease protein | BCF11_3630 | Not Available | Positive | 3916576 - 3917244 | 24068.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
