Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yvtn family beta-propeller protein | BCF11_3601 | Not Available | Negative | 3879883 - 3881061 | 41878.2 |
| creatinine amidohydrolase/fe(ii)-dependent formamide hydrolase-like protein | BCF11_3602 | Not Available | Negative | 3881110 - 3881925 | 28973.7 |
| aldose 1-epimerase | BCF11_3603 | Not Available | Negative | 3882134 - 3883195 | 38088.2 |
| laci family transcriptional regulator | BCF11_3604 | Not Available | Negative | 3883192 - 3884421 | 45389.4 |
| xylose isomerase | BCF11_3605 | Not Available | Positive | 3884723 - 3886039 | 48825.6 |
| xylulokinase | BCF11_3606 | Not Available | Positive | 3886044 - 3887555 | 53646.5 |
| d-xylose transport system substrate-binding protein | BCF11_3607 | Not Available | Positive | 3887621 - 3888637 | 36309.8 |
| d-xylose transport system atp-binding protein | BCF11_3608 | Not Available | Positive | 3888877 - 3890487 | 58307.1 |
| d-xylose transport system permease protein | BCF11_3609 | Not Available | Positive | 3890484 - 3891623 | 40502.3 |
| threonine/homoserine/homoserine lactone efflux protein | BCF11_3610 | Not Available | Positive | 3891853 - 3892494 | 22952.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
