Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system permease protein | BCF11_0157 | Not Available | Negative | 175978 - 176775 | 28473.8 |
| putative spermidine/putrescine transport system permease protein | BCF11_0158 | Not Available | Negative | 176793 - 177668 | 31405.7 |
| putative spermidine/putrescine transport system atp-binding protein | BCF11_0159 | Not Available | Negative | 177661 - 178737 | 39511.5 |
| dna-binding iclr family transcriptional regulator | BCF11_0160 | Not Available | Positive | 178923 - 179759 | 29713.3 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | BCF11_0161 | Not Available | Negative | 179906 - 180898 | 35505.2 |
| dna-binding transcriptional lysr family regulator | BCF11_0162 | Not Available | Positive | 181023 - 181976 | 34854.9 |
| hypothetical protein | BCF11_0163 | Not Available | Positive | 183191 - 183487 | 10914.3 |
| hypothetical protein | BCF11_0164 | Not Available | Negative | 183684 - 183929 | 9303.06 |
| putative transposase | BCF11_0165 | Not Available | Positive | 184638 - 184904 | 10326.6 |
| putative transposase | BCF11_0166 | Not Available | Positive | 184925 - 185725 | 30789.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
