Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | BCF11_3519 | Not Available | Negative | 3794787 - 3795497 | 26995.0 |
| rimj/riml family protein n-acetyltransferase | BCF11_3520 | Not Available | Positive | 3795641 - 3796174 | 19467.5 |
| dna ligase-1 | BCF11_3521 | Not Available | Negative | 3796152 - 3797033 | 32455.3 |
| hypothetical protein | BCF11_3522 | Not Available | Negative | 3797136 - 3797522 | 14156.0 |
| aaa domain-containing protein | BCF11_3523 | Not Available | Positive | 3797752 - 3798162 | 14851.7 |
| hypothetical protein | BCF11_3524 | Not Available | Positive | 3798620 - 3799069 | 15640.8 |
| hypothetical protein | BCF11_3525 | Not Available | Positive | 3799169 - 3800593 | 50799.1 |
| ser/thr protein kinase rdoa (mazf antagonist) | BCF11_3527 | Not Available | Positive | 3801480 - 3802472 | 37510.3 |
| small multidrug resistance pump | BCF11_3528 | Not Available | Negative | 3802491 - 3802820 | 11589.7 |
| lysr family transcriptional regulator for bpeef and oprc | BCF11_3529 | Not Available | Negative | 3802886 - 3803782 | 33090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
