Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-heptose:lps heptosyltransferase | BCF11_3345 | Not Available | Positive | 3618316 - 3619431 | 42456.4 |
| udp-glucose:(glucosyl)lps alpha-1,3-glucosyltransferase | BCF11_3346 | Not Available | Positive | 3619435 - 3620397 | 35733.0 |
| adp-heptose:lps heptosyltransferase | BCF11_3347 | Not Available | Negative | 3620403 - 3621446 | 38886.0 |
| udp-glucose:(glucosyl)lps alpha-1,3-glucosyltransferase | BCF11_3348 | Not Available | Negative | 3621674 - 3622645 | 37282.1 |
| integrase | BCF11_3349 | Not Available | Positive | 3622833 - 3624101 | 47278.5 |
| putative oligomerization/nucleic acid binding protein | BCF11_3350 | Not Available | Negative | 3624255 - 3625253 | 36040.6 |
| hypothetical protein | BCF11_3351 | Not Available | Negative | 3625396 - 3625809 | 15301.4 |
| helix-turn-helix protein | BCF11_3352 | Not Available | Positive | 3625948 - 3626265 | 11376.9 |
| peptidase c39-like protein | BCF11_3353 | Not Available | Negative | 3626271 - 3626672 | 15170.4 |
| hypothetical protein | BCF11_3354 | Not Available | Negative | 3626722 - 3627060 | 12532.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
