Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine/homoserine lactone efflux protein | BCF11_3200 | Not Available | Negative | 3466694 - 3467311 | 20689.1 |
| lrp/asnc family leucine-responsive transcriptional regulator | BCF11_3201 | Not Available | Positive | 3467445 - 3467897 | 16352.9 |
| lamin tail domain | BCF11_3202 | Not Available | Positive | 3468623 - 3470464 | 65989.9 |
| hypothetical protein | BCF11_3203 | Not Available | Positive | 3470667 - 3471245 | 20570.1 |
| rimj/riml family protein n-acetyltransferase | BCF11_3204 | Not Available | Negative | 3471322 - 3471888 | 21777.5 |
| hypothetical protein | BCF11_3205 | Not Available | Positive | 3472526 - 3473038 | 19143.7 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCF11_3206 | Not Available | Positive | 3473401 - 3474030 | 23288.6 |
| anti-sigma factor rsiw | BCF11_3207 | Not Available | Positive | 3474030 - 3474722 | 25411.1 |
| cytochrome c | BCF11_3208 | Not Available | Positive | 3474894 - 3475283 | 14093.0 |
| secreted protein | BCF11_3209 | Not Available | Positive | 3475372 - 3476277 | 33322.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
