Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | BCF11_3180 | Not Available | Positive | 3442291 - 3444603 | 84127.4 |
| fatty-acyl-coa synthase | BCF11_3181 | Not Available | Positive | 3444987 - 3446639 | 60857.5 |
| 5'-nucleotidase | BCF11_3182 | Not Available | Negative | 3446668 - 3447582 | 33975.6 |
| collagen-like protein | BCF11_3183 | Not Available | Positive | 3447951 - 3449519 | 46622.0 |
| hemolysin activation/secretion protein | BCF11_3184 | Not Available | Positive | 3449748 - 3451466 | 61349.9 |
| pilus assembly protein flp/pila | BCF11_3185 | Not Available | Positive | 3452015 - 3452191 | 6035.56 |
| prepilin peptidase cpaa | BCF11_3186 | Not Available | Positive | 3452256 - 3452798 | 19373.3 |
| flp pilus assembly protein tadg | BCF11_3187 | Not Available | Positive | 3452881 - 3453372 | 17131.8 |
| pilus assembly protein cpab | BCF11_3188 | Not Available | Positive | 3453528 - 3454535 | 34131.8 |
| pilus assembly protein cpac | BCF11_3189 | Not Available | Positive | 3454569 - 3455873 | 44893.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
