Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux system outer membrane protein | BCF11_3160 | Not Available | Negative | 3419454 - 3420899 | 52012.6 |
| multidrug efflux pump | BCF11_3161 | Not Available | Negative | 3420892 - 3424044 | 112311.0 |
| membrane fusion protein (multidrug efflux system) | BCF11_3162 | Not Available | Negative | 3424056 - 3425267 | 41697.7 |
| tetr family transcriptional regulator | BCF11_3163 | Not Available | Positive | 3425547 - 3426191 | 24434.5 |
| outer membrane protein | BCF11_3164 | Not Available | Negative | 3426304 - 3427605 | 46710.1 |
| rhodanese-related sulfurtransferase | BCF11_3165 | Not Available | Negative | 3427634 - 3427957 | 11869.2 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | BCF11_3166 | Not Available | Negative | 3427966 - 3428631 | 24126.1 |
| acrr family transcriptional regulator | BCF11_3167 | Not Available | Negative | 3428775 - 3429428 | 24273.3 |
| cysteine sulfinate desulfinase/cysteine desulfurase-like protein | BCF11_3168 | Not Available | Negative | 3429576 - 3431645 | 72958.5 |
| lrp/asnc family transcriptional regulator | BCF11_3169 | Not Available | Positive | 3431769 - 3432248 | 17710.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
