Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid hydroxylase-like protein | BCF11_3149 | Not Available | Positive | 3410027 - 3410908 | 33090.4 |
| 3-deoxy-d-manno-octulosonic-acid transferase | BCF11_3150 | Not Available | Positive | 3410905 - 3412254 | 49424.4 |
| uncharacterized sam-binding protein ycdf (duf218 family) | BCF11_3151 | Not Available | Positive | 3412257 - 3413045 | 28159.6 |
| rieske-like 2fe-2s protein | BCF11_3152 | Not Available | Negative | 3413119 - 3414120 | 38426.3 |
| sugar o-acyltransferase (sialic acid o-acetyltransferase neud family) | BCF11_3153 | Not Available | Negative | 3414236 - 3414868 | 21510.2 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | BCF11_3154 | Not Available | Negative | 3414865 - 3415632 | 26445.8 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | BCF11_3155 | Not Available | Negative | 3415622 - 3416629 | 36083.1 |
| acyl carrier protein | BCF11_3156 | Not Available | Negative | 3416677 - 3416898 | 7860.36 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | BCF11_3157 | Not Available | Negative | 3416923 - 3417933 | 36467.8 |
| 2'-5' rna ligase | BCF11_3159 | Not Available | Positive | 3418708 - 3419322 | 22495.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
