Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | BCF11_3117 | Not Available | Positive | 3373439 - 3373984 | 20472.2 |
| dtdp-4-dehydrorhamnose reductase | BCF11_3118 | Not Available | Positive | 3373981 - 3374856 | 32258.8 |
| o-antigen/teichoic acid export membrane protein | BCF11_3119 | Not Available | Positive | 3375029 - 3376300 | 45532.5 |
| rhamnosyltransferase | BCF11_3120 | Not Available | Positive | 3376372 - 3377115 | 28099.6 |
| hypothetical protein | BCF11_3121 | Not Available | Positive | 3377115 - 3378341 | 46974.3 |
| oligosaccharide repeat unit polymerase | BCF11_3122 | Not Available | Positive | 3378609 - 3379931 | 50810.4 |
| udp-glucose 4-epimerase | BCF11_3123 | Not Available | Positive | 3380151 - 3381185 | 38330.3 |
| udp-2-acetamido-2,6-beta-l-arabino-hexul-4-ose reductase | BCF11_3124 | Not Available | Positive | 3381190 - 3382296 | 41355.5 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | BCF11_3125 | Not Available | Positive | 3382299 - 3383426 | 42040.7 |
| glycosyltransferase involved in cell wall biosynthesis | BCF11_3126 | Not Available | Positive | 3383450 - 3384682 | 45434.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
