Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxyl carrier protein | BCF11_3087 | Not Available | Negative | 3339721 - 3340185 | 16367.8 |
| 3-dehydroquinate dehydratase | BCF11_3088 | Not Available | Negative | 3340307 - 3340744 | 15455.6 |
| peroxiredoxin | BCF11_3089 | Not Available | Negative | 3340874 - 3341395 | 18756.9 |
| hypothetical protein | BCF11_3090 | Not Available | Negative | 3341395 - 3342027 | 23139.4 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | BCF11_3091 | Not Available | Positive | 3342219 - 3343607 | 49720.9 |
| hypothetical protein | BCF11_3092 | Not Available | Positive | 3343604 - 3344191 | 21623.9 |
| chorismate--pyruvate lyase | BCF11_3093 | Not Available | Positive | 3344188 - 3344841 | 24630.8 |
| exoribonuclease-2 | BCF11_3094 | Not Available | Positive | 3344910 - 3346994 | 75968.7 |
| protein tonb | BCF11_3095 | Not Available | Positive | 3347137 - 3348036 | 33008.4 |
| shikimate dehydrogenase | BCF11_3096 | Not Available | Positive | 3348033 - 3348896 | 30324.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
