Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional lysr family regulator | BCF11_3047 | Not Available | Positive | 3292585 - 3293490 | 34071.0 |
| glycolate oxidase | BCF11_3048 | Not Available | Positive | 3293648 - 3295171 | 54012.1 |
| glycolate oxidase fad binding subunit | BCF11_3049 | Not Available | Positive | 3295180 - 3296265 | 38072.7 |
| glycolate oxidase iron-sulfur subunit | BCF11_3050 | Not Available | Positive | 3296284 - 3297522 | 45386.3 |
| putative porin | BCF11_3051 | Not Available | Negative | 3297554 - 3298735 | 41195.8 |
| alpha-glucosidase | BCF11_3052 | Not Available | Negative | 3298752 - 3301223 | 93293.5 |
| acs family hexuronate transporter-like mfs transporter | BCF11_3053 | Not Available | Negative | 3301246 - 3302523 | 46533.1 |
| uronate dehydrogenase | BCF11_3054 | Not Available | Negative | 3302684 - 3303469 | 28934.2 |
| sugar lactone lactonase yvre | BCF11_3055 | Not Available | Negative | 3303469 - 3304356 | 32037.8 |
| glucarate dehydratase | BCF11_3056 | Not Available | Negative | 3304457 - 3305806 | 49011.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
