Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c reductase cytochrome b subunit | BCF11_2924 | Not Available | Positive | 3164541 - 3165944 | 52496.9 |
| ubiquinol-cytochrome c reductase cytochrome c1 subunit | BCF11_2925 | Not Available | Positive | 3165974 - 3166756 | 29193.3 |
| rna polymerase-associated protein | BCF11_2926 | Not Available | Positive | 3166838 - 3167449 | 23807.1 |
| stringent starvation protein b | BCF11_2927 | Not Available | Positive | 3167546 - 3168055 | 18334.5 |
| Trna-thr | Not Available | Not Available | Positive | 3168081 - 3168153 | Not Available |
| transposase | BCF11_2929 | Not Available | Negative | 3168200 - 3169402 | 46870.0 |
| carbohydrate binding protein | BCF11_2931 | Not Available | Negative | 3170241 - 3172316 | 72449.8 |
| hypothetical protein | BCF11_2932 | Not Available | Negative | 3173244 - 3173552 | 11639.2 |
| dna-binding transcriptional lysr family regulator | BCF11_2933 | Not Available | Negative | 3173929 - 3174858 | 33428.1 |
| pimeloyl-acp methyl ester carboxylesterase | BCF11_2934 | Not Available | Positive | 3175013 - 3175948 | 34386.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
