Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-subunit amino acid transport system substrate-binding protein | BCF11_2844 | Not Available | Negative | 3075515 - 3076639 | 39486.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | BCF11_2845 | Not Available | Positive | 3076901 - 3077821 | 33792.8 |
| dna-binding gntr family transcriptional regulator | BCF11_2846 | Not Available | Positive | 3077923 - 3078597 | 24558.8 |
| nadp-dependent aldehyde dehydrogenase | BCF11_2847 | Not Available | Positive | 3078620 - 3080194 | 54736.3 |
| hypothetical protein | BCF11_2848 | Not Available | Negative | 3080198 - 3081049 | 30552.8 |
| lysr family glycine cleavage system transcriptional activator | BCF11_2849 | Not Available | Negative | 3081056 - 3081958 | 33448.8 |
| nitrate/nitrite transporter nark | BCF11_2850 | Not Available | Positive | 3082093 - 3083322 | 43178.1 |
| d-amino peptidase | BCF11_2851 | Not Available | Negative | 3083774 - 3084592 | 28563.6 |
| d-aminopeptidase | BCF11_2852 | Not Available | Negative | 3084607 - 3085641 | 35385.5 |
| glutathione transport system permease protein | BCF11_2853 | Not Available | Negative | 3085641 - 3086546 | 32336.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
