Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | BCF11_2774 | Not Available | Positive | 3015040 - 3015864 | 29343.0 |
| cyclase | BCF11_2775 | Not Available | Positive | 3015861 - 3016625 | 26836.3 |
| phosphoribosyl-amp cyclohydrolase | BCF11_2776 | Not Available | Positive | 3016622 - 3017017 | 15056.8 |
| hypothetical protein | BCF11_2777 | Not Available | Positive | 3017017 - 3017154 | 4735.67 |
| phosphoribosyl-atp pyrophosphatase | BCF11_2778 | Not Available | Positive | 3017162 - 3017539 | 13750.2 |
| histidine triad (hit) family protein | BCF11_2779 | Not Available | Positive | 3017607 - 3017978 | 13459.3 |
| sec-independent protein translocase protein tata | BCF11_2780 | Not Available | Positive | 3018081 - 3018290 | 7424.09 |
| sec-independent protein translocase protein tatb | BCF11_2781 | Not Available | Positive | 3018355 - 3018849 | 17956.6 |
| sec-independent protein translocase protein tatc | BCF11_2782 | Not Available | Positive | 3018922 - 3019707 | 28700.3 |
| uncharacterized protein (tigr02453 family) | BCF11_2783 | Not Available | Negative | 3019754 - 3020440 | 25813.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
