Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pils-like protein | BCF11_2704 | Not Available | Positive | 2945042 - 2945584 | 18582.2 |
| pilm protein | BCF11_2705 | Not Available | Positive | 2945615 - 2946091 | 17065.6 |
| tfp pilus assembly protein pilw | BCF11_2706 | Not Available | Positive | 2946111 - 2947703 | 55760.0 |
| transglycosylase-like protein with slt domain | BCF11_2707 | Not Available | Positive | 2947708 - 2948154 | 16345.6 |
| hypothetical protein | BCF11_2708 | Not Available | Negative | 2948458 - 2950194 | 63487.9 |
| tetratricopeptide repeat protein | BCF11_2709 | Not Available | Negative | 2950447 - 2951112 | 23775.2 |
| twitching motility protein pilt | BCF11_2710 | Not Available | Negative | 2951151 - 2952245 | 40753.3 |
| dna-binding response ompr family regulator | BCF11_2711 | Not Available | Positive | 2952732 - 2953415 | 25629.0 |
| regulatory fis family protein | BCF11_2712 | Not Available | Positive | 2953569 - 2955122 | 56714.3 |
| type iii secretion system (t3ss) basal body protein i (ysci/hrpb/psci-like) | BCF11_2713 | Not Available | Positive | 2955335 - 2955742 | 14252.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
