Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system atp-binding protein | BCF11_2643 | Not Available | Negative | 2877540 - 2878286 | 27249.1 |
| lipopolysaccharide export system protein lpta | BCF11_2644 | Not Available | Negative | 2878283 - 2878825 | 19763.6 |
| lipopolysaccharide export system protein lptc | BCF11_2645 | Not Available | Negative | 2878881 - 2879486 | 22980.8 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | BCF11_2646 | Not Available | Negative | 2879483 - 2880085 | 21256.1 |
| arabinose-5-phosphate isomerase | BCF11_2647 | Not Available | Negative | 2880085 - 2881116 | 36040.6 |
| cpa2 family monovalent cation:h+ antiporter-2 | BCF11_2648 | Not Available | Positive | 2881256 - 2883280 | 72852.5 |
| putative iron-regulated membrane protein | BCF11_2649 | Not Available | Positive | 2883457 - 2884599 | 41508.1 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like fad-dependent oxidoreductase | BCF11_2650 | Not Available | Negative | 2884611 - 2885828 | 44033.3 |
| phytanoyl-coa hydroxylase | BCF11_2651 | Not Available | Negative | 2885852 - 2886631 | 28418.7 |
| excinuclease abc subunit a | BCF11_2652 | Not Available | Negative | 2886683 - 2889556 | 105922.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
