Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane putative beta-barrel porin/alpha-amylase | BCF11_2623 | Not Available | Negative | 2854984 - 2855751 | 28046.9 |
| diaminopimelate decarboxylase | BCF11_2624 | Not Available | Negative | 2855781 - 2857064 | 46264.3 |
| putative lipoprotein | BCF11_2625 | Not Available | Negative | 2857074 - 2857307 | 8013.03 |
| cyay protein | BCF11_2626 | Not Available | Positive | 2857349 - 2857675 | 11682.8 |
| hypothetical protein | BCF11_2627 | Not Available | Positive | 2857944 - 2859221 | 43013.7 |
| hypothetical protein | BCF11_2628 | Not Available | Positive | 2859221 - 2859868 | 22595.0 |
| uncharacterized protein duf2827 | BCF11_2629 | Not Available | Positive | 2859926 - 2861068 | 43718.1 |
| uncharacterized protein duf2827 | BCF11_2630 | Not Available | Positive | 2861290 - 2862435 | 42740.6 |
| uncharacterized protein duf2827 | BCF11_2631 | Not Available | Positive | 2862432 - 2863568 | 43508.9 |
| penicillin-binding protein 1a | BCF11_2632 | Not Available | Negative | 2863610 - 2865922 | 84395.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
