Collimonas sp. PA-H2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas sp. PA-H2 is a bacterial strain characterized by a single replicon, indicating its genetic structure is organized in a single circular chromosome. The strain is cataloged under the accession number PDBX00000000.1, which provides a reference point for researchers interested in studying its genomic features and biological functions. The unique trait of Collimonas sp. PA-H2 lies in its ecological niche. Members of the Collimonas genus are known for their saprophytic lifestyle, where they play an essential role in decomposing organic matter in soil environments. This capability enables them to contribute to nutrient cycling, enhancing soil fertility and supporting plant growth. The precise metabolic pathways and ecological interactions of Collimonas sp. PA-H2 may provide insights into its role in soil ecosystems, particularly in how it interacts with other microorganisms and contributes to the degradation of organic substrates. Understanding these interactions is vital for appreciating the broader implications of this strain in ecological dynamics and soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas sp. PA-H2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas sp. PA-H2 Ga0114272_12, whole genome shotgun sequence.

Gene Summary

Adenine Count

1222070 bp

Thymine Count

1231824 bp

Guanine Count

1746065 bp

Cytosine Count

1745750 bp

Genome Length

5945709 bp

Protein-coding Genes

5176 genes

Non-Coding Genes

215 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lsu ribosomal protein l14pBCF11_2592Not AvailablePositive2831318 - 283168613351.6
large subunit ribosomal protein l24BCF11_2593Not AvailablePositive2831696 - 283201011124.7
large subunit ribosomal protein l5BCF11_2594Not AvailablePositive2832017 - 283255620135.8
small subunit ribosomal protein s14BCF11_2595Not AvailablePositive2832564 - 283286911627.3
small subunit ribosomal protein s8BCF11_2596Not AvailablePositive2832884 - 283327914094.3
large subunit ribosomal protein l6BCF11_2597Not AvailablePositive2833290 - 283382318855.9
large subunit ribosomal protein l18BCF11_2598Not AvailablePositive2833836 - 283419812854.6
small subunit ribosomal protein s5BCF11_2599Not AvailablePositive2834211 - 283472918067.5
lsu ribosomal protein l30pBCF11_2600Not AvailablePositive2834740 - 28349196508.15
large subunit ribosomal protein l15BCF11_2601Not AvailablePositive2834946 - 283537715132.7

Displaying genes 2691 – 2700 of 5391 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.