Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin vapb | BCF11_2305 | Not Available | Positive | 2497938 - 2498210 | 10221.2 |
| trna(fmet)-specific endonuclease vapc | BCF11_2306 | Not Available | Positive | 2498210 - 2498620 | 14929.9 |
| peptidyl-dipeptidase dcp | BCF11_2307 | Not Available | Positive | 2498718 - 2500772 | 75792.9 |
| s1/p1 nuclease | BCF11_2308 | Not Available | Negative | 2500836 - 2501774 | 33298.0 |
| hypothetical protein | BCF11_2309 | Not Available | Positive | 2502047 - 2502703 | 25691.3 |
| hypothetical protein | BCF11_2310 | Not Available | Positive | 2502700 - 2502909 | 7532.85 |
| two-component system sensor histidine kinase qsec | BCF11_2311 | Not Available | Negative | 2502966 - 2504354 | 51182.1 |
| two-component system response regulator qseb | BCF11_2312 | Not Available | Negative | 2504351 - 2505034 | 25028.5 |
| hypothetical protein | BCF11_2313 | Not Available | Positive | 2505204 - 2505500 | 10409.8 |
| dmso/tmao reductase yedyz molybdopterin-dependent catalytic subunit | BCF11_2314 | Not Available | Negative | 2505539 - 2506297 | 28320.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
