Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nnp family nitrate/nitrite transporter-like mfs transporter | BCF11_2295 | Not Available | Positive | 2484583 - 2485947 | 47920.5 |
| nitrite reductase (nadh) large subunit | BCF11_2296 | Not Available | Positive | 2485959 - 2488538 | 93323.5 |
| nitrite reductase (nadh) small subunit | BCF11_2297 | Not Available | Positive | 2488549 - 2488896 | 12393.7 |
| nitrite reductase (nadh) large subunit | BCF11_2298 | Not Available | Positive | 2488893 - 2490164 | 45933.8 |
| assimilatory nitrate reductase catalytic subunit | BCF11_2299 | Not Available | Positive | 2490177 - 2492945 | 99779.7 |
| alpha,alpha-trehalase | BCF11_2300 | Not Available | Positive | 2493012 - 2494646 | 60714.9 |
| putative mfs family arabinose efflux permease | BCF11_2301 | Not Available | Negative | 2494665 - 2495852 | 41421.7 |
| dna-binding transcriptional lysr family regulator | BCF11_2302 | Not Available | Negative | 2495933 - 2496847 | 32891.9 |
| hypothetical protein | BCF11_2303 | Not Available | Positive | 2496962 - 2497441 | 18983.2 |
| hypothetical protein | BCF11_2304 | Not Available | Negative | 2497475 - 2497780 | 11358.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
