Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipate coa-transferase beta subunit | BCF11_2285 | Not Available | Positive | 2477085 - 2477726 | 22192.8 |
| acetyl-coa c-acetyltransferase | BCF11_2286 | Not Available | Positive | 2477763 - 2478965 | 41623.2 |
| nicotinamidase-related amidase | BCF11_2287 | Not Available | Positive | 2479051 - 2479590 | 19561.0 |
| putative transposase of is4/5 family duf4096 | BCF11_2288 | Not Available | Positive | 2479743 - 2480210 | 18158.5 |
| prop effector | BCF11_2289 | Not Available | Negative | 2480378 - 2480824 | 16774.2 |
| hypothetical protein | BCF11_2290 | Not Available | Positive | 2480871 - 2481113 | 8622.21 |
| putative dna-binding transcriptional regulator yafy | BCF11_2291 | Not Available | Negative | 2481044 - 2481994 | 35267.7 |
| threonine/homoserine/homoserine lactone efflux protein | BCF11_2292 | Not Available | Positive | 2482104 - 2482748 | 22682.7 |
| amidase | BCF11_2293 | Not Available | Negative | 2482745 - 2484238 | 52326.4 |
| hypothetical protein | BCF11_2294 | Not Available | Positive | 2484271 - 2484549 | 9992.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
