Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase tcte | BCF11_0043 | Not Available | Negative | 69065 - 70453 | 51285.5 |
| dna-binding response ompr family regulator | BCF11_0044 | Not Available | Negative | 70450 - 71139 | 25374.0 |
| dna-binding transcriptional merr regulator | BCF11_0045 | Not Available | Positive | 71320 - 71715 | 14927.2 |
| 4-carboxymuconolactone decarboxylase | BCF11_0046 | Not Available | Positive | 71733 - 72137 | 14622.5 |
| lysr family nitrogen assimilation transcriptional regulator | BCF11_0047 | Not Available | Negative | 72451 - 73389 | 33749.4 |
| d-galactonate transporter | BCF11_0048 | Not Available | Positive | 73595 - 74902 | 47444.0 |
| ribosomal protein s18 acetylase rimi-like enzyme | BCF11_0049 | Not Available | Positive | 74915 - 75361 | 16265.6 |
| hypothetical protein | BCF11_0050 | Not Available | Positive | 75586 - 75909 | 12103.5 |
| protein of unknown function (duf3096) | BCF11_0051 | Not Available | Positive | 76455 - 76595 | 5021.66 |
| hypothetical protein | BCF11_0052 | Not Available | Positive | 76936 - 77061 | 4449.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
