Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-methionine transport system substrate-binding protein | BCF11_0033 | Not Available | Positive | 53808 - 54617 | 29395.6 |
| atp-dependent clp protease protease subunit | BCF11_0034 | Not Available | Positive | 54747 - 55325 | 20966.2 |
| methionine synthase (b12-independent) | BCF11_0035 | Not Available | Negative | 55427 - 57715 | 84910.6 |
| lysr family transcriptional regulator for mete and meth | BCF11_0036 | Not Available | Positive | 57872 - 58792 | 34224.5 |
| cvnh domain-containing protein | BCF11_0037 | Not Available | Negative | 58831 - 59436 | 21478.8 |
| pseudolysin/vibriolysin | BCF11_0038 | Not Available | Positive | 59896 - 61704 | 63823.5 |
| tetratricopeptide repeat protein | BCF11_0039 | Not Available | Negative | 62281 - 62817 | 19441.8 |
| cystathionine gamma-lyase | BCF11_0040 | Not Available | Negative | 62814 - 64025 | 43494.3 |
| cystathionine beta-synthase | BCF11_0041 | Not Available | Negative | 64022 - 65404 | 49766.7 |
| iron complex outermembrane receptor protein | BCF11_0042 | Not Available | Negative | 65627 - 68491 | 101961.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
