Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate-semialdehyde dehydrogenase (acetylating)/methylmalonate-semialdehyde dehydrogenase | BCF11_2071 | Not Available | Negative | 2245056 - 2246582 | 54401.9 |
| dna-binding transcriptional lysr family regulator | BCF11_2072 | Not Available | Positive | 2246734 - 2247621 | 32677.8 |
| aspartate carbamoyltransferase catalytic subunit | BCF11_2073 | Not Available | Positive | 2248464 - 2249765 | 48004.4 |
| hypothetical protein | BCF11_2074 | Not Available | Negative | 2249920 - 2251947 | 71812.1 |
| uncharacterized protein duf3300 | BCF11_2075 | Not Available | Positive | 2252236 - 2254257 | 72177.6 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | BCF11_2076 | Not Available | Negative | 2254380 - 2258111 | 133652.0 |
| lrp/asnc family leucine-responsive transcriptional regulator | BCF11_2077 | Not Available | Positive | 2258422 - 2258880 | 17226.2 |
| hypothetical protein | BCF11_2078 | Not Available | Positive | 2258972 - 2259226 | 8950.37 |
| type i phosphodiesterase/nucleotide pyrophosphatase | BCF11_2079 | Not Available | Positive | 2259535 - 2261256 | 61657.0 |
| laci family transcriptional regulator | BCF11_2080 | Not Available | Negative | 2261275 - 2262309 | 37398.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
