Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system substrate-binding protein | BCF11_2041 | Not Available | Negative | 2214239 - 2215279 | 37525.0 |
| putative spermidine/putrescine transport system atp-binding protein | BCF11_2042 | Not Available | Negative | 2215332 - 2216474 | 41723.6 |
| 4-aminobutyrate aminotransferase/4-aminobutyrate aminotransferase/(s)-3-amino-2-methylpropionate transaminase | BCF11_2043 | Not Available | Negative | 2216494 - 2217831 | 47176.4 |
| gntr family transcriptional regulator/mocr family aminotransferase | BCF11_2044 | Not Available | Positive | 2217936 - 2219447 | 55544.2 |
| cyclohexadienyl dehydratase | BCF11_2045 | Not Available | Positive | 2219498 - 2220271 | 28410.3 |
| threonine/homoserine/homoserine lactone efflux protein | BCF11_2046 | Not Available | Negative | 2220281 - 2220928 | 22640.2 |
| lysophospholipase l1-like esterase | BCF11_2047 | Not Available | Negative | 2221006 - 2221824 | 29538.5 |
| ppk2 family polyphosphate:nucleotide phosphotransferase | BCF11_2048 | Not Available | Negative | 2221917 - 2222723 | 30572.9 |
| hypothetical protein | BCF11_2049 | Not Available | Negative | 2222775 - 2223209 | 15672.2 |
| polar amino acid transport system substrate-binding protein | BCF11_2050 | Not Available | Negative | 2223394 - 2224164 | 27576.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
