Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ectoine hydroxylase-related dioxygenase (phytanoyl-coa dioxygenase family) | BCF11_2031 | Not Available | Positive | 2201757 - 2202707 | 36734.1 |
| acyl-coa thioesterase fadm | BCF11_2032 | Not Available | Positive | 2202863 - 2203375 | 19578.5 |
| signal transduction histidine kinase | BCF11_2033 | Not Available | Negative | 2203420 - 2204808 | 51380.1 |
| dha1 family inner membrane transport protein | BCF11_2034 | Not Available | Negative | 2205206 - 2206378 | 40331.9 |
| outer membrane protein ompa-like peptidoglycan-associated protein | BCF11_2035 | Not Available | Negative | 2206601 - 2207362 | 28051.8 |
| pseudomonalisin | BCF11_2036 | Not Available | Negative | 2207668 - 2209554 | 64368.7 |
| hypothetical protein | BCF11_2037 | Not Available | Positive | 2210216 - 2210515 | 11784.8 |
| succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase | BCF11_2038 | Not Available | Negative | 2210476 - 2211927 | 51166.8 |
| putative spermidine/putrescine transport system permease protein | BCF11_2039 | Not Available | Negative | 2212009 - 2212842 | 29956.5 |
| putative spermidine/putrescine transport system permease protein | BCF11_2040 | Not Available | Negative | 2212847 - 2214142 | 46980.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
