Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | BCF11_2001 | Not Available | Positive | 2177035 - 2177580 | 20141.8 |
| alkyl hydroperoxide reductase subunit d | BCF11_2002 | Not Available | Positive | 2177738 - 2178247 | 17715.5 |
| protein tonb | BCF11_2003 | Not Available | Positive | 2178381 - 2178851 | 17010.5 |
| regulator of nucleoside diphosphate kinase | BCF11_2004 | Not Available | Positive | 2179027 - 2179437 | 14668.5 |
| hypothetical protein | BCF11_2005 | Not Available | Positive | 2179540 - 2180049 | 19112.8 |
| elab/yqjd/duf883 family membrane-anchored ribosome-binding protein | BCF11_2006 | Not Available | Positive | 2180262 - 2180564 | 10721.7 |
| putative membrane protein yqje | BCF11_2007 | Not Available | Positive | 2180589 - 2180975 | 13901.6 |
| hypothetical protein | BCF11_2008 | Not Available | Positive | 2180990 - 2181373 | 13492.5 |
| outer membrane protein ompa-like peptidoglycan-associated protein | BCF11_2009 | Not Available | Positive | 2181433 - 2182122 | 23258.5 |
| cytochrome c5 | BCF11_2010 | Not Available | Negative | 2182197 - 2182793 | 19906.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
