Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bira family biotin operon repressor/biotin-[acetyl-coa-carboxylase] ligase | BCF11_1891 | Not Available | Negative | 2061826 - 2062680 | 29511.8 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | BCF11_1892 | Not Available | Positive | 2063030 - 2064154 | 40067.8 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | BCF11_1893 | Not Available | Positive | 2064154 - 2064936 | 28470.9 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | BCF11_1894 | Not Available | Positive | 2064989 - 2065936 | 33941.8 |
| cholesterol transport system auxiliary component | BCF11_1895 | Not Available | Positive | 2065954 - 2066553 | 21080.5 |
| vanz family protein | BCF11_1896 | Not Available | Positive | 2066553 - 2067722 | 43420.5 |
| (2fe-2s) ferredoxin | BCF11_1897 | Not Available | Positive | 2067783 - 2068151 | 13661.4 |
| hypothetical protein | BCF11_1898 | Not Available | Positive | 2068197 - 2068832 | 23218.2 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | BCF11_1899 | Not Available | Positive | 2069044 - 2070189 | 41296.7 |
| hypothetical protein | BCF11_1900 | Not Available | Negative | 2070511 - 2070684 | 6695.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
