Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| basic membrane protein a | BCF11_1779 | Not Available | Positive | 1948238 - 1949287 | 36570.2 |
| dna-binding transcriptional lysr family regulator | BCF11_1780 | Not Available | Positive | 1949359 - 1950261 | 33485.9 |
| protein of unknown function (duf3096) | BCF11_1781 | Not Available | Negative | 1950274 - 1950429 | 5574.27 |
| ferredoxin | BCF11_1782 | Not Available | Positive | 1950567 - 1950872 | 11089.4 |
| 4-oxalocrotonate tautomerase | BCF11_1783 | Not Available | Negative | 1950881 - 1951297 | 14779.7 |
| nicotinamidase-related amidase | BCF11_1784 | Not Available | Negative | 1951367 - 1951999 | 22609.7 |
| lrp/asnc family leucine-responsive transcriptional regulator | BCF11_1785 | Not Available | Negative | 1952157 - 1952636 | 17810.7 |
| ornithine--oxo-acid transaminase | BCF11_1786 | Not Available | Positive | 1952884 - 1954122 | 44349.4 |
| n-dimethylarginine dimethylaminohydrolase | BCF11_1787 | Not Available | Positive | 1954119 - 1954997 | 31944.2 |
| methionine synthase (b12-dependent) | BCF11_1788 | Not Available | Positive | 1955130 - 1958891 | 137816.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
