Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/methionine/tyrosine aminotransferase | BCF11_1749 | Not Available | Negative | 1917367 - 1918545 | 43013.6 |
| dna topoisomerase-3 | BCF11_1750 | Not Available | Negative | 1918905 - 1921538 | 97605.2 |
| smg protein | BCF11_1751 | Not Available | Negative | 1921822 - 1922301 | 18154.8 |
| dna processing protein | BCF11_1752 | Not Available | Negative | 1922474 - 1923634 | 40409.6 |
| lysm domain-containing protein | BCF11_1753 | Not Available | Negative | 1923693 - 1924766 | 38981.7 |
| peptide deformylase | BCF11_1754 | Not Available | Positive | 1924972 - 1925502 | 19910.0 |
| methionyl-trna formyltransferase | BCF11_1755 | Not Available | Positive | 1925608 - 1926561 | 33568.9 |
| glucose-6-phosphate 1-epimerase | BCF11_1756 | Not Available | Negative | 1926558 - 1927439 | 32419.2 |
| acetyltransferase (gnat) family protein | BCF11_1757 | Not Available | Negative | 1927503 - 1927988 | 17139.6 |
| phosphonate transport system permease protein | BCF11_1758 | Not Available | Negative | 1928114 - 1928917 | 29046.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
