Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hicb family rnase h-like nuclease | BCF11_1739 | Not Available | Negative | 1908235 - 1908648 | 14790.3 |
| hica-like toxin of hicab toxin-antitoxin system | BCF11_1740 | Not Available | Negative | 1908650 - 1908913 | 9840.88 |
| radical sam superfamily enzyme ygiq (upf0313 family) | BCF11_1741 | Not Available | Positive | 1909132 - 1910652 | 56685.5 |
| uncharacterized protein duf3717 | BCF11_1742 | Not Available | Negative | 1910641 - 1910886 | 8837.64 |
| d-ribose pyranase | BCF11_1743 | Not Available | Negative | 1910939 - 1911331 | 13850.1 |
| ribokinase | BCF11_1744 | Not Available | Negative | 1911333 - 1912247 | 30914.1 |
| laci family transcriptional regulator | BCF11_1745 | Not Available | Negative | 1912300 - 1913289 | 34849.1 |
| ribose transport system permease protein | BCF11_1746 | Not Available | Negative | 1913335 - 1914435 | 38455.3 |
| ribose transport system atp-binding protein | BCF11_1747 | Not Available | Negative | 1914386 - 1916005 | 57779.0 |
| ribose transport system substrate-binding protein | BCF11_1748 | Not Available | Negative | 1916116 - 1917072 | 33375.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
