Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | BCF11_1709 | Not Available | Negative | 1876534 - 1877109 | 21296.1 |
| putative hydrolase of the had superfamily | BCF11_1710 | Not Available | Negative | 1877201 - 1877923 | 28015.5 |
| hypothetical protein | BCF11_1711 | Not Available | Positive | 1877928 - 1878986 | 38176.7 |
| omega-6 fatty acid desaturase (delta-12 desaturase) | BCF11_1712 | Not Available | Positive | 1879147 - 1880232 | 41819.4 |
| crp/fnr family transcriptional regulator | BCF11_1713 | Not Available | Positive | 1880336 - 1881085 | 27857.9 |
| oxygen-independent coproporphyrinogen-3 oxidase | BCF11_1714 | Not Available | Negative | 1881096 - 1882523 | 53603.7 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | BCF11_1715 | Not Available | Positive | 1882677 - 1884497 | 65810.7 |
| yxwgxw repeat-containing protein | BCF11_1716 | Not Available | Negative | 1884514 - 1884831 | 12187.8 |
| hypothetical protein | BCF11_1717 | Not Available | Positive | 1885098 - 1886729 | 58981.7 |
| mrna interferase rele/stbe | BCF11_1718 | Not Available | Negative | 1886763 - 1887044 | 10902.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
