Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 1799861 - 1799937 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1800059 - 1801595 | Not Available |
| malonyl-coa o-methyltransferase | BCF11_1641 | Not Available | Negative | 1802106 - 1803050 | 34770.0 |
| comf family protein | BCF11_1642 | Not Available | Positive | 1803171 - 1803926 | 27846.5 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | BCF11_1643 | Not Available | Positive | 1803969 - 1804451 | 17565.1 |
| hypothetical protein | BCF11_1644 | Not Available | Positive | 1804573 - 1805052 | 16734.3 |
| rfae bifunctional protein nucleotidyltransferase chain/domain | BCF11_1645 | Not Available | Negative | 1805120 - 1805599 | 17032.5 |
| hypothetical protein | BCF11_1646 | Not Available | Negative | 1805693 - 1806547 | 33407.8 |
| hypothetical protein | BCF11_1647 | Not Available | Negative | 1807170 - 1807826 | 22544.9 |
| branched-chain amino acid transport system substrate-binding protein | BCF11_1648 | Not Available | Negative | 1807872 - 1809170 | 47036.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
