Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system atp-binding protein | BCF11_1629 | Not Available | Negative | 1788334 - 1789323 | 35933.2 |
| peptide/nickel transport system permease protein | BCF11_1630 | Not Available | Negative | 1789330 - 1790235 | 32610.9 |
| peptide/nickel transport system permease protein | BCF11_1631 | Not Available | Negative | 1790237 - 1791214 | 35409.1 |
| peptide/nickel transport system substrate-binding protein | BCF11_1632 | Not Available | Negative | 1791291 - 1792886 | 58818.7 |
| hippurate hydrolase | BCF11_1633 | Not Available | Positive | 1793003 - 1794196 | 43040.2 |
| sugar lactone lactonase yvre | BCF11_1634 | Not Available | Positive | 1794317 - 1795204 | 31709.6 |
| lipid a 3-o-deacylase pagl | BCF11_1635 | Not Available | Positive | 1795428 - 1795976 | 19841.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1796266 - 1796378 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1796572 - 1799447 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1799776 - 1799851 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
