Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative phage tail fiber protein | BCF11_3427 | Not Available | Negative | 3698842 - 3701001 | 76524.2 |
| Phage-related tail protein | BCF11_3428 | Not Available | Negative | 3701006 - 3701560 | 20654.9 |
| Phage baseplate assembly protein j | BCF11_3429 | Not Available | Negative | 3701557 - 3702447 | 32170.5 |
| Baseplate wedge subunit | BCF11_3430 | Not Available | Negative | 3702444 - 3702782 | 12101.7 |
| Putative baseplate assembly protein v | BCF11_3431 | Not Available | Negative | 3702779 - 3703453 | 23921.3 |
| hypothetical protein | BCF11_3432 | Not Available | Negative | 3703748 - 3704032 | 10778.8 |
| immunity protein 51 of polymorphic toxin system | BCF11_3433 | Not Available | Positive | 3704565 - 3705035 | 17171.4 |
| hypothetical protein | BCF11_3434 | Not Available | Positive | 3705247 - 3705552 | 10958.1 |
| Transposase | BCF11_3435 | Not Available | Positive | 3706361 - 3706645 | 11463.8 |
| Phage virion morphogenesis protein | BCF11_3436 | Not Available | Negative | 3706740 - 3707207 | 17560.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
