Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCF11_1418 | Not Available | Negative | 1564493 - 1565728 | 44288.9 |
| dna-binding transcriptional lysr family regulator | BCF11_1419 | Not Available | Positive | 1565819 - 1566763 | 34732.2 |
| helix-turn-helix protein | BCF11_1420 | Not Available | Negative | 1566780 - 1567142 | 12962.5 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | BCF11_1421 | Not Available | Positive | 1567182 - 1568021 | 29715.6 |
| tryptophanyl-trna synthetase | BCF11_1422 | Not Available | Negative | 1568538 - 1569572 | 37753.5 |
| putative lipid-binding transport protein (tim44 family) | BCF11_1423 | Not Available | Negative | 1569740 - 1570684 | 32343.0 |
| hypothetical protein | BCF11_1424 | Not Available | Negative | 1570918 - 1571259 | 11955.1 |
| two-component system ompr family response regulator | BCF11_1425 | Not Available | Positive | 1571407 - 1572132 | 26599.2 |
| two-component system sensor histidine kinase tcte | BCF11_1426 | Not Available | Positive | 1572142 - 1573680 | 56917.4 |
| putative solute:sodium symporter small subunit | BCF11_1427 | Not Available | Positive | 1573707 - 1573976 | 10447.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
